Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm23287-201ENSMUST00000179427 116 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm23143-201ENSMUST00000180137 116 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Vis1-201ENSMUST00000183957 201 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Mir6362-201ENSMUST00000184329 107 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm27160-201ENSMUST00000184837 199 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm38061-201ENSMUST00000192490 365 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Trbv28-201ENSMUST00000192804 264 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm37430-201ENSMUST00000193039 196 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm18635-201ENSMUST00000199020 1060 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 AC153957.1-201ENSMUST00000215235 229 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 AV026068-220ENSMUST00000224153 1147 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 AC154738.2-201ENSMUST00000227403 1110 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm24871-201ENSMUST00000083099 116 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm25099-201ENSMUST00000093716 116 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Rnu5g-201ENSMUST00000093721 116 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.82□□□□□ -1.48
Usp39Q3TIX9 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm25346-201ENSMUST00000104509 128 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm9432-201ENSMUST00000117810 759 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm2003-201ENSMUST00000118537 636 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm12677-201ENSMUST00000118668 426 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm14998-201ENSMUST00000120502 495 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm1989-201ENSMUST00000126244 636 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm23046-201ENSMUST00000158369 284 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm6055-201ENSMUST00000180532 378 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm27960-201ENSMUST00000183445 184 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm27193-201ENSMUST00000184217 586 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm28527-201ENSMUST00000185210 297 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm4412-201ENSMUST00000186660 433 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm6445-201ENSMUST00000189515 1112 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm17952-201ENSMUST00000193914 747 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm4332-201ENSMUST00000196114 346 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm42976-201ENSMUST00000200313 222 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 AC125523.1-201ENSMUST00000228018 934 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Usp39Q3TIX9 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.81□□□□□ -1.48
Usp39Q3TIX9 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms