Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm23294-201ENSMUST00000104150 164 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm24789-201ENSMUST00000104282 131 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm15400-201ENSMUST00000118944 601 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm14620-201ENSMUST00000120656 383 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm23965-201ENSMUST00000157969 142 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm15812-201ENSMUST00000162331 748 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm27037-201ENSMUST00000182270 960 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm5334-201ENSMUST00000187472 720 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm37421-201ENSMUST00000193088 132 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm23514-201ENSMUST00000082827 130 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.74□□□□□ -1.65
Nkx3-1P97436 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.74□□□□□ -1.65
Nkx3-1P97436 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Zfp389-201ENSMUST00000118425 675 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm14769-201ENSMUST00000118590 432 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm11227-201ENSMUST00000119774 471 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm12322-201ENSMUST00000121605 389 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm25291-201ENSMUST00000122795 144 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm16260-201ENSMUST00000155141 304 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm25383-201ENSMUST00000157810 144 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm37581-201ENSMUST00000192371 988 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm43631-201ENSMUST00000202011 369 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm34165-201ENSMUST00000222012 1174 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nkx3-1P97436 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nkx3-1P97436 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gm45426-201ENSMUST00000209393 3672 ntBASIC4.73□□□□□ -1.65
Nkx3-1P97436 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm14874-201ENSMUST00000118995 438 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 H3f3c-201ENSMUST00000119459 411 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm11369-201ENSMUST00000120812 318 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms