Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm44219-201ENSMUST00000203005 273 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Gm44582-201ENSMUST00000209125 445 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Gm45525-201ENSMUST00000210800 389 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Gm18255-201ENSMUST00000211316 765 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sox3P53784 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.27□□□□□ -1.57
Sox3P53784 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Gm8412-201ENSMUST00000077493 440 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox3P53784 Gm6104-201ENSMUST00000078030 603 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sox3P53784 Gm10540-201ENSMUST00000097581 276 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sox3P53784 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox3P53784 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox3P53784 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.27□□□□□ -1.57
Sox3P53784 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.27□□□□□ -1.57
Sox3P53784 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.26□□□□□ -1.57
Sox3P53784 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Sox3P53784 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm24265-201ENSMUST00000101833 141 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm13770-201ENSMUST00000117149 305 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm11805-201ENSMUST00000121238 600 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.26□□□□□ -1.57
Sox3P53784 Gm25826-201ENSMUST00000157090 137 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm3216-201ENSMUST00000166927 486 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm3141-201ENSMUST00000168726 499 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Olfr331-202ENSMUST00000170501 957 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm17907-201ENSMUST00000173150 710 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm22122-201ENSMUST00000175147 200 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm24407-201ENSMUST00000177864 141 ntBASIC5.26□□□□□ -1.57
Sox3P53784 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28604-201ENSMUST00000186629 484 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28566-201ENSMUST00000186714 484 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28194-201ENSMUST00000187412 484 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28886-202ENSMUST00000187889 484 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28554-202ENSMUST00000189175 484 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29213-202ENSMUST00000189703 484 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28851-202ENSMUST00000189757 484 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28461-201ENSMUST00000190023 484 ntBASIC5.26□□□□□ -1.57
Sox3P53784 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox3P53784 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms