Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm18971-201ENSMUST00000197240 374 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm45196-201ENSMUST00000206751 825 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm45432-201ENSMUST00000210391 416 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm19232-201ENSMUST00000211621 652 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm34005-201ENSMUST00000215834 282 ntBASIC6.73□□□□□ -1.33
Sox1P53783 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm5649-201ENSMUST00000217918 951 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm6049-201ENSMUST00000222369 458 ntBASIC6.73□□□□□ -1.33
Sox1P53783 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox1P53783 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm10540-201ENSMUST00000097581 276 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox1P53783 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm13230-201ENSMUST00000120870 1575 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Sox1P53783 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.73□□□□□ -1.33
Sox1P53783 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.72□□□□□ -1.33
Sox1P53783 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Gm12638-201ENSMUST00000119531 298 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm11512-201ENSMUST00000119669 663 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm22596-201ENSMUST00000157601 316 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm24438-201ENSMUST00000157893 115 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox1P53783 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm27036-201ENSMUST00000182465 980 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm29596-201ENSMUST00000185710 385 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm28802-201ENSMUST00000188624 944 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm28779-201ENSMUST00000189678 323 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm5853-201ENSMUST00000197183 632 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm43148-201ENSMUST00000198237 520 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox1P53783 Gm2314-201ENSMUST00000200391 586 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox1P53783 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Gm17766-201ENSMUST00000209223 442 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm45474-201ENSMUST00000209471 408 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Gm4921-201ENSMUST00000219804 992 ntBASIC6.72□□□□□ -1.33
Sox1P53783 AC154371.1-201ENSMUST00000226600 412 ntBASIC6.72□□□□□ -1.33
Sox1P53783 AC154532.2-201ENSMUST00000228947 598 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox1P53783 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox1P53783 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox1P53783 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox1P53783 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Gm43369-201ENSMUST00000196373 1552 ntBASIC6.72□□□□□ -1.33
Sox1P53783 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox1P53783 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms