Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm8724-201ENSMUST00000081668 483 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.52□□□□□ -1.21
Rfx1P48377 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.52□□□□□ -1.21
Rfx1P48377 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rfx1P48377 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Rfx1P48377 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Rfx1P48377 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 AC120375.1-201ENSMUST00000227034 3612 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Rfx1P48377 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Rfx1P48377 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm25546-201ENSMUST00000103977 132 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm14904-201ENSMUST00000117067 335 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm12433-201ENSMUST00000119659 255 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Gm12103-201ENSMUST00000121892 362 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Gm15111-201ENSMUST00000122142 878 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Gm6081-201ENSMUST00000134472 489 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Gm24545-201ENSMUST00000158651 85 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Gm16589-201ENSMUST00000159522 918 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm26509-201ENSMUST00000180947 948 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Mir7j-201ENSMUST00000184427 122 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.51□□□□□ -1.21
Rfx1P48377 Ighv5-5-201ENSMUST00000193826 329 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 AC156952.1-201ENSMUST00000220361 793 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.51□□□□□ -1.21
Rfx1P48377 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.51□□□□□ -1.21
Rfx1P48377 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.51□□□□□ -1.21
Rfx1P48377 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm5374-201ENSMUST00000222868 657 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Rfx1P48377 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Rfx1P48377 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Rfx1P48377 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Rfx1P48377 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Rfx1P48377 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.51□□□□□ -1.21
Rfx1P48377 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Rfx1P48377 Gm45548-201ENSMUST00000210076 3167 ntBASIC7.51□□□□□ -1.21
Rfx1P48377 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm43843-201ENSMUST00000202396 1587 ntBASIC7.5□□□□□ -1.21
Rfx1P48377 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Rfx1P48377 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm9239-201ENSMUST00000186942 2557 ntBASIC7.5□□□□□ -1.21
Rfx1P48377 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Rfx1P48377 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Rfx1P48377 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm12077-201ENSMUST00000117049 364 ntBASIC7.5□□□□□ -1.21
Rfx1P48377 Gm13473-201ENSMUST00000119289 367 ntBASIC7.5□□□□□ -1.21
Rfx1P48377 Gm11344-201ENSMUST00000122011 335 ntBASIC7.5□□□□□ -1.21
Rfx1P48377 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.5□□□□□ -1.21
Rfx1P48377 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC7.5□□□□□ -1.21
Rfx1P48377 Gm6155-201ENSMUST00000173735 341 ntBASIC7.5□□□□□ -1.21
Rfx1P48377 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.5□□□□□ -1.21
Rfx1P48377 Mup-ps7-201ENSMUST00000178292 545 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms