Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm15233-201ENSMUST00000118747 400 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm18199-201ENSMUST00000173820 835 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm24949-201ENSMUST00000183609 215 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm37659-201ENSMUST00000194574 111 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Mir219c-201ENSMUST00000199860 60 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm8911-201ENSMUST00000213986 652 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm5750-201ENSMUST00000218711 801 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.04□□□□□ -1.6
Tnfsf4P43488 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.04□□□□□ -1.6
Tnfsf4P43488 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm15022-201ENSMUST00000122074 746 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm25246-201ENSMUST00000175476 69 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm27460-201ENSMUST00000184213 100 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm6074-201ENSMUST00000193340 451 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm43456-201ENSMUST00000202519 457 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm44820-201ENSMUST00000207420 396 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm45249-201ENSMUST00000211021 348 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm33178-201ENSMUST00000212090 257 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm18996-201ENSMUST00000214851 755 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Mir20a-201ENSMUST00000083508 107 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.03□□□□□ -1.6
Tnfsf4P43488 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm14711-201ENSMUST00000117056 217 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.02□□□□□ -1.61
Tnfsf4P43488 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm2325-201ENSMUST00000186637 581 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm28996-201ENSMUST00000190316 721 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm38015-201ENSMUST00000193048 188 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm37966-201ENSMUST00000193122 326 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.02□□□□□ -1.61
Tnfsf4P43488 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms