Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.43□□□□□ -1.54
HttP42859 Gm28468-201ENSMUST00000188536 615 ntBASIC5.43□□□□□ -1.54
HttP42859 Gm30280-201ENSMUST00000192214 262 ntBASIC5.43□□□□□ -1.54
HttP42859 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HttP42859 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC5.43□□□□□ -1.54
HttP42859 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HttP42859 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.43□□□□□ -1.54
HttP42859 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC5.43□□□□□ -1.54
HttP42859 Gm16558-201ENSMUST00000163015 532 ntBASIC5.43□□□□□ -1.54
HttP42859 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.43□□□□□ -1.54
HttP42859 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.43□□□□□ -1.54
HttP42859 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.43□□□□□ -1.54
HttP42859 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HttP42859 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.43□□□□□ -1.54
HttP42859 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC5.43□□□□□ -1.54
HttP42859 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Gm37364-201ENSMUST00000192533 3920 ntBASIC5.43□□□□□ -1.54
HttP42859 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.43□□□□□ -1.54
HttP42859 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HttP42859 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
HttP42859 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HttP42859 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.43□□□□□ -1.54
HttP42859 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Gm42630-201ENSMUST00000195908 3448 ntBASIC5.43□□□□□ -1.54
HttP42859 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.43□□□□□ -1.54
HttP42859 Gm23781-201ENSMUST00000157940 308 ntBASIC5.43□□□□□ -1.54
HttP42859 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HttP42859 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HttP42859 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
HttP42859 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.42□□□□□ -1.54
HttP42859 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 AC183268.1-201ENSMUST00000215753 2837 ntBASIC5.42□□□□□ -1.54
HttP42859 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Gm6071-201ENSMUST00000119561 440 ntBASIC5.42□□□□□ -1.54
HttP42859 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.42□□□□□ -1.54
HttP42859 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Gm26075-201ENSMUST00000104062 121 ntBASIC5.42□□□□□ -1.54
HttP42859 Gm6079-201ENSMUST00000121356 404 ntBASIC5.42□□□□□ -1.54
HttP42859 Gm6673-201ENSMUST00000166114 700 ntBASIC5.42□□□□□ -1.54
HttP42859 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.42□□□□□ -1.54
HttP42859 Gm27805-201ENSMUST00000184513 79 ntBASIC5.42□□□□□ -1.54
HttP42859 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.42□□□□□ -1.54
HttP42859 Gm38040-201ENSMUST00000193505 225 ntBASIC5.42□□□□□ -1.54
HttP42859 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC5.42□□□□□ -1.54
HttP42859 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.42□□□□□ -1.54
HttP42859 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HttP42859 Gm37367-201ENSMUST00000191771 2602 ntBASIC5.42□□□□□ -1.54
HttP42859 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HttP42859 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Gm14854-201ENSMUST00000117758 841 ntBASIC5.41□□□□□ -1.54
HttP42859 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.41□□□□□ -1.54
HttP42859 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.41□□□□□ -1.54
HttP42859 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC5.41□□□□□ -1.54
HttP42859 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
HttP42859 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HttP42859 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HttP42859 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HttP42859 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HttP42859 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HttP42859 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.41□□□□□ -1.54
HttP42859 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.41□□□□□ -1.54
HttP42859 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HttP42859 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.41□□□□□ -1.54
HttP42859 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HttP42859 Gm15772-201ENSMUST00000118533 438 ntBASIC5.41□□□□□ -1.54
HttP42859 Gm11617-201ENSMUST00000119609 639 ntBASIC5.41□□□□□ -1.54
HttP42859 Gm11506-201ENSMUST00000122414 470 ntBASIC5.41□□□□□ -1.54
HttP42859 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.41□□□□□ -1.54
HttP42859 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms