Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.6□□□□□ -1.51
Cxcl12P40224 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm22220-201ENSMUST00000082671 149 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm23508-201ENSMUST00000083079 72 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cxcl12P40224 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.6□□□□□ -1.51
Cxcl12P40224 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cxcl12P40224 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm14172-201ENSMUST00000118255 644 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm17014-201ENSMUST00000120765 168 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm14212-201ENSMUST00000122023 826 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm16114-201ENSMUST00000161930 300 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm20519-201ENSMUST00000173684 359 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm23945-201ENSMUST00000179609 92 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Mir6933-201ENSMUST00000184982 81 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm2367-201ENSMUST00000192374 472 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm44307-201ENSMUST00000204466 764 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.59□□□□□ -1.51
Cxcl12P40224 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.59□□□□□ -1.51
Cxcl12P40224 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cxcl12P40224 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Cxcl12P40224 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cxcl12P40224 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
Cxcl12P40224 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Cxcl12P40224 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.59□□□□□ -1.52
Cxcl12P40224 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Cxcl12P40224 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm23883-201ENSMUST00000122686 290 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm3362-201ENSMUST00000148102 466 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm25865-201ENSMUST00000158247 104 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm17121-201ENSMUST00000170414 847 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm17222-201ENSMUST00000180135 847 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm27387-201ENSMUST00000184583 116 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm6362-201ENSMUST00000217686 836 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm8264-201ENSMUST00000217801 465 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm8158-201ENSMUST00000219220 465 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 Gm8112-201ENSMUST00000219637 465 ntBASIC5.58□□□□□ -1.52
Cxcl12P40224 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms