Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Rfc1P35601 Gm13924-201ENSMUST00000119899 486 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm12293-201ENSMUST00000121898 590 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm26410-201ENSMUST00000157670 261 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm25387-201ENSMUST00000157813 132 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm23050-201ENSMUST00000158775 165 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm17137-202ENSMUST00000165729 957 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Rfc1P35601 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Rfc1P35601 Gm26057-201ENSMUST00000178099 165 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Rfc1P35601 Gm28934-201ENSMUST00000186491 346 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.7□□□□□ -1.5
Rfc1P35601 Gm2142-201ENSMUST00000197899 589 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm4083-201ENSMUST00000207158 451 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm7802-201ENSMUST00000216464 262 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm4510-201ENSMUST00000218265 427 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm3086-202ENSMUST00000221248 310 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Rfc1P35601 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Rfc1P35601 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Rfc1P35601 Gm23737-201ENSMUST00000082547 159 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Rfc1P35601 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.7□□□□□ -1.5
Rfc1P35601 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Rfc1P35601 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Rfc1P35601 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.7□□□□□ -1.5
Rfc1P35601 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.69□□□□□ -1.5
Rfc1P35601 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm15660-201ENSMUST00000118997 478 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm12303-201ENSMUST00000119506 673 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Gm14619-201ENSMUST00000120480 168 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm26069-201ENSMUST00000157497 277 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm6717-201ENSMUST00000185549 838 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Gm21617-201ENSMUST00000188297 691 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.69□□□□□ -1.5
Rfc1P35601 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Gm43392-201ENSMUST00000196560 434 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Gm43516-201ENSMUST00000196891 322 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm31306-201ENSMUST00000197517 508 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Gm42886-201ENSMUST00000199214 466 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Gm43596-201ENSMUST00000202818 884 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.69□□□□□ -1.5
Rfc1P35601 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rfc1P35601 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm25007-201ENSMUST00000083808 133 ntBASIC5.69□□□□□ -1.5
Rfc1P35601 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.69□□□□□ -1.5
Rfc1P35601 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms