Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm12110-201ENSMUST00000121601 579 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.07□□□□□ -1.44
Col2a1P28481 Gm28385-201ENSMUST00000185671 292 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col2a1P28481 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Gm5457-201ENSMUST00000022260 333 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col2a1P28481 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Mir199a-2-201ENSMUST00000093618 110 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.07□□□□□ -1.44
Col2a1P28481 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col2a1P28481 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.07□□□□□ -1.44
Col2a1P28481 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Col2a1P28481 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 Gm7657-201ENSMUST00000118851 666 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Gm14732-201ENSMUST00000121372 545 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.06□□□□□ -1.44
Col2a1P28481 Gm5699-201ENSMUST00000152491 723 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Gm6542-201ENSMUST00000153606 772 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Gm23327-201ENSMUST00000157420 78 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Gm23354-201ENSMUST00000158426 104 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.06□□□□□ -1.44
Col2a1P28481 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.06□□□□□ -1.44
Col2a1P28481 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.06□□□□□ -1.44
Col2a1P28481 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col2a1P28481 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.06□□□□□ -1.44
Col2a1P28481 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Col2a1P28481 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm24160-201ENSMUST00000104594 126 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm14352-201ENSMUST00000119250 449 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Gm15388-201ENSMUST00000121578 726 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.05□□□□□ -1.44
Col2a1P28481 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm25271-201ENSMUST00000157273 290 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Gm24685-201ENSMUST00000157764 285 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm9499-201ENSMUST00000180888 964 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm37503-201ENSMUST00000192088 319 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Gm37719-201ENSMUST00000194615 292 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.05□□□□□ -1.44
Col2a1P28481 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Col2a1P28481 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Col2a1P28481 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col2a1P28481 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col2a1P28481 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.05□□□□□ -1.44
Col2a1P28481 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col2a1P28481 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col2a1P28481 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col2a1P28481 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col2a1P28481 Gm22468-201ENSMUST00000116680 120 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm26248-201ENSMUST00000116700 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm26137-201ENSMUST00000116701 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm26190-201ENSMUST00000116704 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm24617-201ENSMUST00000116705 121 ntBASIC6.04□□□□□ -1.44
Col2a1P28481 Gm25778-201ENSMUST00000116713 121 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms