Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm23302-201ENSMUST00000082710 100 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cdx1P18111 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.55□□□□□ -1.68
Cdx1P18111 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cdx1P18111 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdx1P18111 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
Cdx1P18111 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm37725-201ENSMUST00000193965 2125 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.54□□□□□ -1.68
Cdx1P18111 Mir546-201ENSMUST00000102105 121 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Mir700-201ENSMUST00000102169 79 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdx1P18111 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm22714-201ENSMUST00000116894 78 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm15901-201ENSMUST00000117663 941 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm14115-201ENSMUST00000119242 482 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm12281-201ENSMUST00000119536 298 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm11679-201ENSMUST00000121830 779 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Cdx1P18111 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC4.54□□□□□ -1.68
Cdx1P18111 Snora47-201ENSMUST00000157483 138 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm23030-201ENSMUST00000158004 273 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm16566-201ENSMUST00000160387 910 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Cdx1P18111 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC4.54□□□□□ -1.68
Cdx1P18111 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm20401-201ENSMUST00000173717 212 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Mir3097-201ENSMUST00000175356 67 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm19560-201ENSMUST00000177510 514 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm2539-203ENSMUST00000181352 746 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm28094-201ENSMUST00000185262 390 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm5692-201ENSMUST00000187254 1057 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm37517-201ENSMUST00000194004 1289 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm37358-201ENSMUST00000195492 479 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm4332-201ENSMUST00000196114 346 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm18330-201ENSMUST00000199246 547 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm6702-201ENSMUST00000208496 471 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC4.54□□□□□ -1.68
Cdx1P18111 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 AC154481.1-201ENSMUST00000223532 331 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 AV026068-224ENSMUST00000224827 928 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Cdx1P18111 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Ap5m1-208ENSMUST00000228238 3514 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx1P18111 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Cdx1P18111 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.54□□□□□ -1.68
Cdx1P18111 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdx1P18111 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdx1P18111 AC158388.2-201ENSMUST00000223665 1314 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Cdx1P18111 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx1P18111 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Cdx1P18111 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC4.53□□□□□ -1.68
Cdx1P18111 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm15400-201ENSMUST00000118944 601 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm11848-201ENSMUST00000121207 973 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm13430-201ENSMUST00000121366 288 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm7931-201ENSMUST00000121537 271 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm15959-201ENSMUST00000121724 368 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx1P18111 Gm25433-201ENSMUST00000158283 286 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm24179-201ENSMUST00000158925 127 ntBASIC4.53□□□□□ -1.68
Cdx1P18111 Gm17060-201ENSMUST00000172394 824 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms