Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.27□□□□□ -1.41
Col1a1P11087 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Col1a1P11087 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Col1a1P11087 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.27□□□□□ -1.41
Col1a1P11087 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.27□□□□□ -1.41
Col1a1P11087 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.27□□□□□ -1.41
Col1a1P11087 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC6.27□□□□□ -1.41
Col1a1P11087 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC6.27□□□□□ -1.41
Col1a1P11087 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC6.27□□□□□ -1.41
Col1a1P11087 Mir6412-201ENSMUST00000184477 97 ntBASIC6.27□□□□□ -1.41
Col1a1P11087 Gm29332-201ENSMUST00000190829 227 ntBASIC6.27□□□□□ -1.41
Col1a1P11087 Trav3-2-201ENSMUST00000198999 305 ntBASIC6.27□□□□□ -1.41
Col1a1P11087 Gm18205-201ENSMUST00000209215 841 ntBASIC6.27□□□□□ -1.41
Col1a1P11087 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.27□□□□□ -1.41
Col1a1P11087 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.27□□□□□ -1.41
Col1a1P11087 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col1a1P11087 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col1a1P11087 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.27□□□□□ -1.41
Col1a1P11087 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Col1a1P11087 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col1a1P11087 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col1a1P11087 Gm15297-201ENSMUST00000117795 290 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.26□□□□□ -1.41
Col1a1P11087 Mir6410-201ENSMUST00000184204 104 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 Gm5511-201ENSMUST00000189380 802 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 Gm28769-201ENSMUST00000190176 615 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 Gm32453-201ENSMUST00000204183 456 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 Gm45228-201ENSMUST00000206585 352 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.26□□□□□ -1.41
Col1a1P11087 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.26□□□□□ -1.41
Col1a1P11087 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col1a1P11087 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col1a1P11087 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col1a1P11087 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col1a1P11087 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col1a1P11087 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.25□□□□□ -1.41
Col1a1P11087 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col1a1P11087 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col1a1P11087 Mup-ps18-201ENSMUST00000120145 531 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col1a1P11087 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Col1a1P11087 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 Gm21850-201ENSMUST00000179792 359 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col1a1P11087 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC6.25□□□□□ -1.41
Col1a1P11087 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC6.25□□□□□ -1.41
Col1a1P11087 AC102542.1-201ENSMUST00000225204 1138 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 AC164597.1-201ENSMUST00000226538 514 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col1a1P11087 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col1a1P11087 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col1a1P11087 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.25□□□□□ -1.41
Col1a1P11087 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col1a1P11087 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col1a1P11087 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.25□□□□□ -1.41
Col1a1P11087 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col1a1P11087 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col1a1P11087 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Col1a1P11087 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
Col1a1P11087 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Col1a1P11087 Gm12854-201ENSMUST00000128518 297 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.24□□□□□ -1.41
Col1a1P11087 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.24□□□□□ -1.41
Col1a1P11087 Gm5699-201ENSMUST00000152491 723 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Gm8214-201ENSMUST00000172123 351 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Gm21909-201ENSMUST00000178260 439 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 Mir6975-201ENSMUST00000184879 61 ntBASIC6.24□□□□□ -1.41
Col1a1P11087 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC6.24□□□□□ -1.41
Col1a1P11087 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC6.24□□□□□ -1.41
Col1a1P11087 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Col1a1P11087 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Col1a1P11087 Gm7665-201ENSMUST00000076710 297 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms