Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Gm12073-201ENSMUST00000117382 524 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Gm26153-201ENSMUST00000157433 127 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Gm8941-201ENSMUST00000181451 899 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Gm27528-201ENSMUST00000183544 205 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col4a6B1AVK5 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.52□□□□□ -1.52
Col4a6B1AVK5 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm13000-201ENSMUST00000120937 496 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm11278-201ENSMUST00000121002 997 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm9512-201ENSMUST00000223112 497 ntBASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Col4a6B1AVK5 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm23593-201ENSMUST00000104309 120 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm15357-201ENSMUST00000119160 285 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm12466-201ENSMUST00000121199 620 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm20056-201ENSMUST00000194813 519 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 CT009480.1-201ENSMUST00000225771 4480 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col4a6B1AVK5 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms