Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm25907-201ENSMUST00000158486 125 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 Gm10319-202ENSMUST00000159439 846 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 Gm8993-201ENSMUST00000182182 983 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.55□□□□□ -1.52
Scn1aA2APX8 Mir7687-201ENSMUST00000184722 59 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 Gm18177-201ENSMUST00000188373 404 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.55□□□□□ -1.52
Scn1aA2APX8 Gm5374-202ENSMUST00000222910 314 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.55□□□□□ -1.52
Scn1aA2APX8 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Scn1aA2APX8 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1aA2APX8 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1aA2APX8 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scn1aA2APX8 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scn1aA2APX8 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm12131-201ENSMUST00000117479 359 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm13077-201ENSMUST00000121941 484 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm23537-201ENSMUST00000157536 330 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Mir6412-201ENSMUST00000184477 97 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm6717-201ENSMUST00000185549 838 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm28353-201ENSMUST00000186482 570 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm28533-201ENSMUST00000186741 570 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm37719-201ENSMUST00000194615 292 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm44281-201ENSMUST00000203090 166 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Mir20a-201ENSMUST00000083508 107 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.54□□□□□ -1.52
Scn1aA2APX8 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scn1aA2APX8 Gm22266-201ENSMUST00000104011 138 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm25418-201ENSMUST00000104214 129 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm15971-201ENSMUST00000119372 211 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Mir6903-201ENSMUST00000183597 88 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm16149-201ENSMUST00000117631 309 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm8202-201ENSMUST00000117682 310 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm23250-201ENSMUST00000157444 267 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm9317-201ENSMUST00000197055 862 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.53□□□□□ -1.52
Scn1aA2APX8 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.53□□□□□ -1.52
Scn1aA2APX8 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Scn1aA2APX8 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms