Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm27004-201ENSMUST00000183300 727 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm29592-201ENSMUST00000189434 370 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm7181-201ENSMUST00000202197 434 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm44088-201ENSMUST00000204595 237 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm6702-201ENSMUST00000208496 471 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm45379-201ENSMUST00000211772 549 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm7413-201ENSMUST00000219498 462 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 CT030254.3-201ENSMUST00000225959 1231 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 AC164597.2-201ENSMUST00000226738 603 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm24029-201ENSMUST00000083928 143 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
H2afb3S4R1G7 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm11271-201ENSMUST00000116054 440 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm12099-201ENSMUST00000118660 750 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm12313-201ENSMUST00000121347 421 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm15237-201ENSMUST00000122104 469 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm16363-201ENSMUST00000132460 877 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm38181-201ENSMUST00000181357 720 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm29489-201ENSMUST00000188934 324 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm18303-201ENSMUST00000190055 1176 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm37884-201ENSMUST00000191857 818 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm29745-201ENSMUST00000198005 687 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm5055-201ENSMUST00000215697 581 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm3266-201ENSMUST00000217832 591 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm2099-201ENSMUST00000220979 412 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 CT485612.3-201ENSMUST00000222179 408 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Glycam1-204ENSMUST00000228895 641 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm24032-201ENSMUST00000083932 159 ntBASIC5.24□□□□□ -1.57
H2afb3S4R1G7 Gm10704-201ENSMUST00000098952 730 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms