Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upk3aQ9JKX8 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.21□□□□□ -1.58
Upk3aQ9JKX8 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Upk3aQ9JKX8 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm12074-201ENSMUST00000120189 219 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm12413-201ENSMUST00000121508 312 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm26086-201ENSMUST00000157902 263 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm24186-201ENSMUST00000157983 127 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Scarna13-201ENSMUST00000158164 275 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm17907-201ENSMUST00000173150 710 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm37072-201ENSMUST00000194570 837 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm37445-201ENSMUST00000195318 242 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm19104-201ENSMUST00000198392 679 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm43215-201ENSMUST00000199108 252 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm45722-201ENSMUST00000213075 466 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm23330-201ENSMUST00000082660 164 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm25682-201ENSMUST00000083942 164 ntBASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.2□□□□□ -1.58
Upk3aQ9JKX8 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm26300-201ENSMUST00000102282 94 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm22266-201ENSMUST00000104011 138 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Mir466j-201ENSMUST00000116876 122 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Zfp389-201ENSMUST00000118425 675 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm3943-201ENSMUST00000118606 718 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm12281-201ENSMUST00000119536 298 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm14563-201ENSMUST00000120571 354 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm24236-201ENSMUST00000157794 134 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Mir7674-201ENSMUST00000184964 63 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28604-201ENSMUST00000186629 484 ntBASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Upk3aQ9JKX8 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms