Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim39Q9ESN2 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim39Q9ESN2 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim39Q9ESN2 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim39Q9ESN2 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm15010-201ENSMUST00000117153 407 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm14787-201ENSMUST00000121236 388 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm13237-201ENSMUST00000122151 635 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm13368-201ENSMUST00000122443 430 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm2709-201ENSMUST00000142979 350 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm17981-201ENSMUST00000191109 739 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm45366-201ENSMUST00000209828 384 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Mif-ps7-201ENSMUST00000223357 327 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 CT025548.1-201ENSMUST00000227459 257 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm24319-201ENSMUST00000083389 107 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm23345-201ENSMUST00000083817 150 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.49□□□□□ -1.37
Trim39Q9ESN2 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm23834-201ENSMUST00000104436 129 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm3940-201ENSMUST00000105087 432 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm7091-201ENSMUST00000116438 586 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm13627-201ENSMUST00000119700 706 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm13525-201ENSMUST00000120607 478 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm26255-201ENSMUST00000122492 103 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm10913-201ENSMUST00000133732 463 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm16331-201ENSMUST00000144274 498 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm25277-201ENSMUST00000157266 324 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm23568-201ENSMUST00000177960 92 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Gm24829-201ENSMUST00000179245 92 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.48□□□□□ -1.37
Trim39Q9ESN2 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms