Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm18199-201ENSMUST00000173820 835 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm27855-201ENSMUST00000184122 128 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 AV026068-237ENSMUST00000226075 572 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lima1Q9ERG0 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm14874-201ENSMUST00000118995 438 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm15754-201ENSMUST00000119191 478 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm15044-201ENSMUST00000120703 598 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm4660-201ENSMUST00000131499 403 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm23662-201ENSMUST00000158046 111 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm22326-201ENSMUST00000158897 351 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm25445-201ENSMUST00000158996 299 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm44307-201ENSMUST00000204466 764 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm44091-201ENSMUST00000205212 649 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm33178-201ENSMUST00000212090 257 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm4510-201ENSMUST00000218265 427 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Lima1Q9ERG0 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm12245-201ENSMUST00000117266 357 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm15959-201ENSMUST00000121724 368 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm23069-201ENSMUST00000158240 311 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm16112-201ENSMUST00000159075 382 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.23□□□□□ -1.57
Lima1Q9ERG0 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms