Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm11804-201ENSMUST00000121663 468 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Mir1970-201ENSMUST00000157839 104 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm21654-201ENSMUST00000188086 691 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm18348-201ENSMUST00000191227 820 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm38185-201ENSMUST00000193195 694 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm20940-201ENSMUST00000197308 360 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm35648-201ENSMUST00000202304 475 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm45249-201ENSMUST00000211021 348 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm32526-201ENSMUST00000221878 981 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Cdc40Q9DC48 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.11□□□□□ -1.59
Cdc40Q9DC48 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm15741-201ENSMUST00000119401 754 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm7079-201ENSMUST00000119726 171 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm22160-201ENSMUST00000158405 328 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm8185-201ENSMUST00000160999 669 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Mir5128-201ENSMUST00000175217 84 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm21959-201ENSMUST00000178439 452 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm27355-201ENSMUST00000185045 128 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm18537-201ENSMUST00000205709 989 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm19880-201ENSMUST00000207731 318 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm2961-201ENSMUST00000211074 772 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm18329-201ENSMUST00000215832 589 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm10064-201ENSMUST00000071235 399 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Gm17165-201ENSMUST00000096155 493 ntBASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Cdc40Q9DC48 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Mir546-201ENSMUST00000102105 121 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm13887-201ENSMUST00000119009 344 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm11369-201ENSMUST00000120812 318 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm14732-201ENSMUST00000121372 545 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm25291-201ENSMUST00000122795 144 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Scarna6-201ENSMUST00000158656 265 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Mir3080-201ENSMUST00000175010 79 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Mir3090-201ENSMUST00000175597 87 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm4617-201ENSMUST00000178993 331 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm8581-201ENSMUST00000188636 890 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm8826-201ENSMUST00000193161 948 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm37355-201ENSMUST00000193345 606 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Gm29755-201ENSMUST00000196976 948 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.09□□□□□ -1.59
Cdc40Q9DC48 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms