Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.12□□□□□ -1.59
Use1Q9CQ56 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Use1Q9CQ56 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm25595-201ENSMUST00000102273 97 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm13772-201ENSMUST00000118431 317 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm14805-201ENSMUST00000120172 340 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm12413-201ENSMUST00000121508 312 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm14237-201ENSMUST00000122080 430 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm26350-201ENSMUST00000157531 288 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm23896-201ENSMUST00000158109 130 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm23855-201ENSMUST00000158377 135 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm16531-201ENSMUST00000180658 967 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm18802-201ENSMUST00000186270 888 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm28640-201ENSMUST00000190918 550 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm18702-201ENSMUST00000196923 588 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Gm10108-201ENSMUST00000078246 319 ntBASIC5.11□□□□□ -1.59
Use1Q9CQ56 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Use1Q9CQ56 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm14874-201ENSMUST00000118995 438 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm23883-201ENSMUST00000122686 290 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm23408-201ENSMUST00000158523 265 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm23386-201ENSMUST00000158585 144 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm17137-202ENSMUST00000165729 957 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Use1Q9CQ56 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Use1Q9CQ56 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm26993-201ENSMUST00000182766 789 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm27219-201ENSMUST00000184633 742 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Mir6952-201ENSMUST00000185092 61 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm29664-201ENSMUST00000191125 463 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.1□□□□□ -1.59
Use1Q9CQ56 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms