Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm22116-201ENSMUST00000158791 141 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm16139-201ENSMUST00000160015 420 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm24957-201ENSMUST00000179604 132 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm18342-201ENSMUST00000186987 694 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm2427-201ENSMUST00000189121 881 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm44360-201ENSMUST00000200081 82 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm42458-201ENSMUST00000201914 369 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm4874-201ENSMUST00000203589 691 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm7890-201ENSMUST00000204877 601 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm4374-201ENSMUST00000204929 424 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm4587-201ENSMUST00000209135 637 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm22807-201ENSMUST00000082737 129 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm26144-201ENSMUST00000104475 132 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm12413-201ENSMUST00000121508 312 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm26350-201ENSMUST00000157531 288 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm22724-201ENSMUST00000158091 127 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm23408-201ENSMUST00000158523 265 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Mir3060-201ENSMUST00000175339 83 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm2539-203ENSMUST00000181352 746 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm37191-201ENSMUST00000193346 388 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm43015-201ENSMUST00000199087 565 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm10145-201ENSMUST00000077776 462 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.22□□□□□ -1.57
Lsm1Q8VC85 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Lsm1Q8VC85 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Lsm1Q8VC85 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Lsm1Q8VC85 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
Lsm1Q8VC85 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.57
Lsm1Q8VC85 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Lsm1Q8VC85 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Lsm1Q8VC85 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.21□□□□□ -1.58
Lsm1Q8VC85 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms