Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm11737-201ENSMUST00000118713 468 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm13430-201ENSMUST00000121366 288 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm25047-201ENSMUST00000122667 104 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm23669-201ENSMUST00000157470 128 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm25433-201ENSMUST00000158283 286 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm27030-201ENSMUST00000182551 464 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm8703-201ENSMUST00000203793 730 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm33178-201ENSMUST00000212090 257 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Rpap2Q8VC34 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Mir290a-201ENSMUST00000104627 83 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm12677-201ENSMUST00000118668 426 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm15103-201ENSMUST00000119893 871 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm14563-201ENSMUST00000120571 354 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm14732-201ENSMUST00000121372 545 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm16285-201ENSMUST00000162999 347 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm20401-201ENSMUST00000173717 212 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Mir5128-201ENSMUST00000175217 84 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm13147-202ENSMUST00000177526 1173 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm27887-201ENSMUST00000184367 102 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm28060-201ENSMUST00000191554 189 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm37581-201ENSMUST00000192371 988 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm44656-201ENSMUST00000208428 490 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 AC164629.1-201ENSMUST00000220250 1113 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rpap2Q8VC34 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms