Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Gm43185-201ENSMUST00000197507 2775 ntBASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.64□□□□□ -1.35
Ccdc9Q8VC31 Gm45378-201ENSMUST00000211063 2711 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm6654-201ENSMUST00000118950 348 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm4853-201ENSMUST00000119359 394 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm15394-201ENSMUST00000119656 1308 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm7554-201ENSMUST00000202282 574 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm44075-201ENSMUST00000204208 216 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm18600-201ENSMUST00000207205 505 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm7351-201ENSMUST00000210745 580 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 AC154730.1-201ENSMUST00000227874 816 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc9Q8VC31 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm43010-201ENSMUST00000195993 2878 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm8692-201ENSMUST00000118102 438 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm11445-201ENSMUST00000119101 532 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm1866-201ENSMUST00000120701 477 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm22223-201ENSMUST00000157360 125 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm22548-201ENSMUST00000174899 78 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm18700-201ENSMUST00000185791 553 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms