Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm14836-201ENSMUST00000118567 471 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm13533-201ENSMUST00000121104 177 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm12322-201ENSMUST00000121605 389 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm14368-201ENSMUST00000145305 415 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm22867-201ENSMUST00000157499 109 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm16112-201ENSMUST00000159075 382 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm20397-201ENSMUST00000174520 362 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm21399-201ENSMUST00000180210 597 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm8604-201ENSMUST00000183150 965 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Vis1-201ENSMUST00000183957 201 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm37681-201ENSMUST00000193880 727 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm37308-201ENSMUST00000194684 100 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm44494-201ENSMUST00000196760 129 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm19060-201ENSMUST00000201959 421 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm44865-201ENSMUST00000207240 531 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 AC159476.2-201ENSMUST00000216221 418 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 AC134335.1-201ENSMUST00000227626 329 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm6104-201ENSMUST00000078030 603 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm23686-201ENSMUST00000083241 164 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Vps53Q8CCB4 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm15400-201ENSMUST00000118944 601 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm11510-201ENSMUST00000120278 347 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm15970-201ENSMUST00000160623 834 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Mir3090-201ENSMUST00000175597 87 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm44392-201ENSMUST00000196758 115 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm43724-201ENSMUST00000197516 226 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm42824-201ENSMUST00000199361 247 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm9038-201ENSMUST00000203400 604 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm45082-201ENSMUST00000206082 601 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm19900-201ENSMUST00000207285 576 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm45628-201ENSMUST00000210849 274 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.63□□□□□ -1.35
Vps53Q8CCB4 AV026068-220ENSMUST00000224153 1147 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Mir133b-201ENSMUST00000083546 119 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Mir331-201ENSMUST00000083673 96 ntBASIC6.63□□□□□ -1.35
Vps53Q8CCB4 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms