Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Alx1Q8C8B0 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Alx1Q8C8B0 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.25□□□□□ -1.41
Alx1Q8C8B0 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Alx1Q8C8B0 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Alx1Q8C8B0 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Alx1Q8C8B0 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.25□□□□□ -1.41
Alx1Q8C8B0 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm13451-201ENSMUST00000117649 592 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm14831-201ENSMUST00000120253 409 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm5383-201ENSMUST00000121177 617 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm26211-201ENSMUST00000158578 129 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Gm44281-201ENSMUST00000203090 166 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 n-R5s62-201ENSMUST00000082780 96 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Mir133b-201ENSMUST00000083546 119 ntBASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Alx1Q8C8B0 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm13537-201ENSMUST00000120467 267 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm11507-201ENSMUST00000156462 412 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm7316-201ENSMUST00000165395 445 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm28353-201ENSMUST00000186482 570 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm28533-201ENSMUST00000186741 570 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm7768-201ENSMUST00000222988 597 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Naip3-201ENSMUST00000118082 4208 ntBASIC6.23□□□□□ -1.41
Alx1Q8C8B0 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Alx1Q8C8B0 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm26300-201ENSMUST00000102282 94 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm9429-201ENSMUST00000117804 868 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm11804-201ENSMUST00000121663 468 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm2325-201ENSMUST00000186637 581 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm6137-201ENSMUST00000187552 578 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Gm4012-201ENSMUST00000221504 581 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.22□□□□□ -1.41
Alx1Q8C8B0 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.22□□□□□ -1.41
Alx1Q8C8B0 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms