Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm11625-201ENSMUST00000119535 296 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm14863-201ENSMUST00000119648 307 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm5843-201ENSMUST00000121631 476 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm12152-201ENSMUST00000122465 684 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm7613-201ENSMUST00000139070 487 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm23754-201ENSMUST00000157576 63 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm25717-201ENSMUST00000158631 353 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm24155-201ENSMUST00000175259 110 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm22990-201ENSMUST00000175427 89 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm19932-201ENSMUST00000177033 313 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm24315-201ENSMUST00000177835 127 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm26426-201ENSMUST00000177866 123 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm26060-201ENSMUST00000180094 123 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm21654-201ENSMUST00000188086 691 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm28846-201ENSMUST00000189161 368 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm37203-201ENSMUST00000191618 385 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm33354-201ENSMUST00000195448 906 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm43689-201ENSMUST00000195951 427 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm43370-201ENSMUST00000196437 284 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm7452-201ENSMUST00000200764 788 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm45122-201ENSMUST00000206376 784 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm45523-201ENSMUST00000210712 799 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm46203-201ENSMUST00000218130 478 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AC170810.3-201ENSMUST00000226177 374 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AC166344.2-201ENSMUST00000226747 374 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AC109172.2-201ENSMUST00000228792 381 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Olfr519-201ENSMUST00000084752 960 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim47Q8C0E3 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm13230-201ENSMUST00000120870 1575 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm24683-201ENSMUST00000104840 88 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm6181-201ENSMUST00000117187 264 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm13357-201ENSMUST00000120528 537 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm13808-201ENSMUST00000121353 184 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm14972-201ENSMUST00000121780 364 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm25970-201ENSMUST00000157165 86 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm23068-201ENSMUST00000158239 293 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm27507-201ENSMUST00000184199 93 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm29563-201ENSMUST00000187249 496 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm28629-201ENSMUST00000187309 263 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm7019-201ENSMUST00000194122 369 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Gm9240-201ENSMUST00000206527 742 ntBASIC7.54□□□□□ -1.2
Trim47Q8C0E3 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms