Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm24940-201ENSMUST00000158326 108 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm24175-201ENSMUST00000158931 129 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm27602-201ENSMUST00000183861 111 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm6543-201ENSMUST00000197353 808 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm43382-201ENSMUST00000198954 838 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm25139-201ENSMUST00000083247 210 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trub1Q8C0D0 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm25595-201ENSMUST00000102273 97 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm23910-201ENSMUST00000104597 132 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm11761-201ENSMUST00000121392 445 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm22804-201ENSMUST00000158052 101 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28604-201ENSMUST00000186629 484 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28566-201ENSMUST00000186714 484 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28194-201ENSMUST00000187412 484 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28886-202ENSMUST00000187889 484 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28554-202ENSMUST00000189175 484 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm29213-202ENSMUST00000189703 484 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28851-202ENSMUST00000189757 484 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28461-201ENSMUST00000190023 484 ntBASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trub1Q8C0D0 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms