Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm13929-201ENSMUST00000117553 1125 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm14094-201ENSMUST00000117717 610 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm14877-201ENSMUST00000119803 478 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm14101-201ENSMUST00000121502 473 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm15646-201ENSMUST00000143317 766 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim35Q8C006 4933406J10Rik-201ENSMUST00000144828 963 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm24039-201ENSMUST00000157878 132 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm23759-201ENSMUST00000158351 268 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm24343-201ENSMUST00000158708 111 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm20447-201ENSMUST00000173290 599 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Mir3066-201ENSMUST00000175296 83 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm22114-201ENSMUST00000177756 107 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm4373-201ENSMUST00000178571 556 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm11395-201ENSMUST00000181011 499 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm11394-201ENSMUST00000181421 517 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm6799-201ENSMUST00000186919 573 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm29441-201ENSMUST00000191584 211 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Trav5-2-201ENSMUST00000199855 280 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm45227-201ENSMUST00000205585 169 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm18058-201ENSMUST00000207385 492 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm45200-201ENSMUST00000207434 919 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 AC154028.1-201ENSMUST00000217071 379 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm8153-201ENSMUST00000219844 952 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 CT009718.4-201ENSMUST00000221881 109 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 AC165157.2-201ENSMUST00000222265 367 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 AC133076.1-201ENSMUST00000228074 484 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Ccl17-201ENSMUST00000034232 514 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Snora65-201ENSMUST00000083190 130 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm23454-201ENSMUST00000083332 133 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Nlrp14-202ENSMUST00000142623 1437 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Sag-209ENSMUST00000177757 1584 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm18289-201ENSMUST00000203356 2989 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Apol10b-201ENSMUST00000089465 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Mns1-201ENSMUST00000034746 5250 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm9165-201ENSMUST00000208467 2044 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 4933402D24Rik-201ENSMUST00000027102 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Serinc4-201ENSMUST00000056312 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Olfr582-204ENSMUST00000214021 3108 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm5405-201ENSMUST00000120478 609 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm27723-201ENSMUST00000157398 63 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm25914-201ENSMUST00000157618 153 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm23120-201ENSMUST00000157654 287 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm22435-201ENSMUST00000158552 128 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm2092-201ENSMUST00000178887 639 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm21816-201ENSMUST00000179255 360 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm2759-201ENSMUST00000179938 639 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm27927-201ENSMUST00000183791 126 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trim35Q8C006 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC8.51□□□□□ -1.05
Trim35Q8C006 Igkv12-40-201ENSMUST00000199208 347 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm18118-201ENSMUST00000201064 645 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 Gm19688-201ENSMUST00000218652 424 ntBASIC8.51□□□□□ -1.05
Trim35Q8C006 AC163354.1-202ENSMUST00000221460 656 ntTSL 5 BASIC8.51□□□□□ -1.05
Trim35Q8C006 CT009509.1-201ENSMUST00000223855 466 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms