Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm24935-201ENSMUST00000103770 110 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm8250-201ENSMUST00000117398 774 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm13176-201ENSMUST00000117910 477 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm11617-201ENSMUST00000119609 639 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm15181-201ENSMUST00000120142 177 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm9435-201ENSMUST00000120379 877 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm2986-201ENSMUST00000121603 382 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm15164-201ENSMUST00000122203 271 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm26162-201ENSMUST00000157793 132 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm22186-201ENSMUST00000157822 122 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Mir1953-201ENSMUST00000157866 89 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm24186-201ENSMUST00000157983 127 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm22646-201ENSMUST00000175130 115 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm8498-201ENSMUST00000188227 974 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm43717-201ENSMUST00000198684 310 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm42452-201ENSMUST00000199749 617 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm44053-201ENSMUST00000203364 929 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm5318-201ENSMUST00000205249 406 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm44857-201ENSMUST00000208331 196 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm6702-201ENSMUST00000208496 471 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm40598-201ENSMUST00000222953 547 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rnf38Q8BI21 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm25422-201ENSMUST00000104219 129 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm11971-201ENSMUST00000117715 288 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm14725-201ENSMUST00000120324 828 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm12881-201ENSMUST00000121191 203 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm15152-201ENSMUST00000121540 394 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm25374-201ENSMUST00000158158 101 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Mir6921-201ENSMUST00000183719 80 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm36985-201ENSMUST00000195595 379 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC5.82□□□□□ -1.48
Rnf38Q8BI21 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 Gm4859-201ENSMUST00000199625 787 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.82□□□□□ -1.48
Rnf38Q8BI21 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms