Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Six1Q62231 Gm27688-201ENSMUST00000183634 91 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Six1Q62231 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28567-201ENSMUST00000190270 693 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Gm37044-201ENSMUST00000193531 693 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Gm38369-201ENSMUST00000195101 693 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Gm44132-201ENSMUST00000205142 151 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.42□□□□□ -1.54
Six1Q62231 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.42□□□□□ -1.54
Six1Q62231 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Six1Q62231 Mir298-201ENSMUST00000083476 82 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Six1Q62231 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Six1Q62231 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Six1Q62231 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Six1Q62231 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.42□□□□□ -1.54
Six1Q62231 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.42□□□□□ -1.54
Six1Q62231 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Six1Q62231 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Six1Q62231 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Six1Q62231 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Six1Q62231 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Gm15194-201ENSMUST00000120453 434 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm21990-201ENSMUST00000124692 383 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Gm24719-201ENSMUST00000157520 110 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm25430-201ENSMUST00000157614 289 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm6632-201ENSMUST00000168425 954 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm27960-201ENSMUST00000183445 184 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.41□□□□□ -1.54
Six1Q62231 Gm6717-201ENSMUST00000185549 838 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm28353-201ENSMUST00000186482 570 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm28533-201ENSMUST00000186741 570 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.41□□□□□ -1.54
Six1Q62231 Gm37308-201ENSMUST00000194684 100 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Six1Q62231 Gm4742-201ENSMUST00000200261 771 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm45845-201ENSMUST00000207326 582 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm17999-201ENSMUST00000211568 542 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm18996-201ENSMUST00000214851 755 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.41□□□□□ -1.54
Six1Q62231 Gm4510-201ENSMUST00000218265 427 ntBASIC5.41□□□□□ -1.54
Six1Q62231 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Six1Q62231 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm22456-201ENSMUST00000082578 125 ntBASIC5.41□□□□□ -1.54
Six1Q62231 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Six1Q62231 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Six1Q62231 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Six1Q62231 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Six1Q62231 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Six1Q62231 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.41□□□□□ -1.54
Six1Q62231 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Six1Q62231 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Six1Q62231 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Six1Q62231 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.4□□□□□ -1.54
Six1Q62231 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Six1Q62231 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 159.6 ms