Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm22370-201ENSMUST00000102422 83 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm12677-201ENSMUST00000118668 426 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm12074-201ENSMUST00000120189 219 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm13533-201ENSMUST00000121104 177 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm12110-201ENSMUST00000121601 579 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm22214-201ENSMUST00000157563 172 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm24216-201ENSMUST00000158259 117 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm21909-201ENSMUST00000178260 439 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm45777-201ENSMUST00000213009 301 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.74□□□□□ -1.49
Upf3bQ3ULL6 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm15073-201ENSMUST00000117432 634 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm8581-201ENSMUST00000188636 890 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm19231-201ENSMUST00000193212 830 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm9332-201ENSMUST00000198431 730 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm42652-201ENSMUST00000199073 614 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm44074-201ENSMUST00000204562 337 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf3bQ3ULL6 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms