Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.4□□□□□ -1.38
Sox9Q04887 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox9Q04887 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 AC126673.2-201ENSMUST00000221052 686 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC6.4□□□□□ -1.38
Sox9Q04887 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.4□□□□□ -1.38
Sox9Q04887 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 AC131068.1-201ENSMUST00000226891 482 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
Sox9Q04887 Gm22053-201ENSMUST00000083394 200 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 Gm22578-201ENSMUST00000083730 107 ntBASIC6.4□□□□□ -1.38
Sox9Q04887 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sox9Q04887 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox9Q04887 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.4□□□□□ -1.39
Sox9Q04887 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.4□□□□□ -1.39
Sox9Q04887 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Sox9Q04887 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Sox9Q04887 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Sox9Q04887 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox9Q04887 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.4□□□□□ -1.39
Sox9Q04887 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sox9Q04887 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm14331-201ENSMUST00000120396 409 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm17194-201ENSMUST00000164610 348 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm17377-201ENSMUST00000165184 207 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm8032-201ENSMUST00000171009 574 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.39□□□□□ -1.39
Sox9Q04887 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm43160-201ENSMUST00000196453 421 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm43554-201ENSMUST00000199987 186 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm43631-201ENSMUST00000202011 369 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm44023-201ENSMUST00000203710 469 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 AC157654.1-201ENSMUST00000224130 820 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox9Q04887 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Gm5229-201ENSMUST00000039375 354 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox9Q04887 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm28392-201ENSMUST00000077630 393 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm17165-201ENSMUST00000096155 493 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC6.39□□□□□ -1.39
Sox9Q04887 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox9Q04887 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 AC169038.1-201ENSMUST00000227378 1352 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC6.39□□□□□ -1.39
Sox9Q04887 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Sox9Q04887 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Sox9Q04887 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox9Q04887 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox9Q04887 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.38□□□□□ -1.39
Sox9Q04887 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox9Q04887 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox9Q04887 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms