Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28567-201ENSMUST00000190270 693 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm37044-201ENSMUST00000193531 693 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm38369-201ENSMUST00000195101 693 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Cma2-202ENSMUST00000228263 857 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.06□□□□□ -1.6
Tnfsf4P43488 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Tnfsf4P43488 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm22266-201ENSMUST00000104011 138 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm25422-201ENSMUST00000104219 129 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm12245-201ENSMUST00000117266 357 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm15185-201ENSMUST00000117397 746 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm13681-201ENSMUST00000117925 210 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm15772-201ENSMUST00000118533 438 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm13367-201ENSMUST00000119955 796 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm24435-201ENSMUST00000157886 110 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm25459-201ENSMUST00000157953 114 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm25445-201ENSMUST00000158996 299 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm10177-201ENSMUST00000160052 444 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm6047-201ENSMUST00000167221 574 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Mir5128-201ENSMUST00000175217 84 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm27653-201ENSMUST00000185037 136 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm2914-201ENSMUST00000186120 328 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm29376-201ENSMUST00000189357 835 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm38011-201ENSMUST00000193312 279 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm37030-201ENSMUST00000194254 295 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm17988-201ENSMUST00000208796 535 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm2961-201ENSMUST00000211074 772 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm16335-201ENSMUST00000077495 309 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.05□□□□□ -1.6
Tnfsf4P43488 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Tnfsf4P43488 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Tnfsf4P43488 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Tnfsf4P43488 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm11212-201ENSMUST00000118337 618 ntBASIC5.04□□□□□ -1.6
Tnfsf4P43488 Gm14560-201ENSMUST00000118672 375 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms