Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC6.48□□□□□ -1.37
Traf1P39428 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Traf1P39428 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Traf1P39428 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Traf1P39428 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.48□□□□□ -1.37
Traf1P39428 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Traf1P39428 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Traf1P39428 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Traf1P39428 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Traf1P39428 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Traf1P39428 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Traf1P39428 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Gm13681-201ENSMUST00000117925 210 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm14610-201ENSMUST00000118358 966 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm14930-201ENSMUST00000118864 652 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm15400-201ENSMUST00000118944 601 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm12222-201ENSMUST00000121368 260 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm23069-201ENSMUST00000158240 311 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm24363-201ENSMUST00000158440 311 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Gm23631-201ENSMUST00000175291 123 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm29284-201ENSMUST00000188363 255 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm9332-201ENSMUST00000198431 730 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm44795-201ENSMUST00000205496 319 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm45789-201ENSMUST00000213038 364 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm18587-201ENSMUST00000213736 841 ntBASIC6.47□□□□□ -1.37
Traf1P39428 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.47□□□□□ -1.37
Traf1P39428 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.47□□□□□ -1.37
Traf1P39428 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Traf1P39428 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Traf1P39428 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Traf1P39428 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Traf1P39428 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.47□□□□□ -1.37
Traf1P39428 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Traf1P39428 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
Traf1P39428 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Traf1P39428 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.46□□□□□ -1.37
Traf1P39428 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Traf1P39428 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Traf1P39428 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.46□□□□□ -1.37
Traf1P39428 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Traf1P39428 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Traf1P39428 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 Gm16007-201ENSMUST00000117837 286 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm15531-201ENSMUST00000118062 252 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm7079-201ENSMUST00000119726 171 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm13430-201ENSMUST00000121366 288 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.46□□□□□ -1.38
Traf1P39428 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.46□□□□□ -1.38
Traf1P39428 Gm3216-201ENSMUST00000166927 486 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm3141-201ENSMUST00000168726 499 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Mir6417-201ENSMUST00000183815 116 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm27855-201ENSMUST00000184122 128 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.46□□□□□ -1.38
Traf1P39428 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Clec2j-202ENSMUST00000203658 606 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm44132-201ENSMUST00000205142 151 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.46□□□□□ -1.38
Traf1P39428 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Traf1P39428 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.46□□□□□ -1.38
Traf1P39428 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.46□□□□□ -1.38
Traf1P39428 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms