Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col18a1P39061 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Col18a1P39061 CT030159.1-201ENSMUST00000221580 2261 ntBASIC7.52□□□□□ -1.2
Col18a1P39061 Gm3675-201ENSMUST00000175904 1653 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col18a1P39061 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
Col18a1P39061 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col18a1P39061 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.52□□□□□ -1.21
Col18a1P39061 Gm23274-201ENSMUST00000104056 130 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Mup-ps22-201ENSMUST00000121611 243 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm16254-201ENSMUST00000131528 730 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm23954-201ENSMUST00000157213 353 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Gm27551-201ENSMUST00000184258 77 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm27690-201ENSMUST00000184596 126 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC7.52□□□□□ -1.21
Col18a1P39061 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col18a1P39061 Ighv3-2-201ENSMUST00000191842 349 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm44137-201ENSMUST00000203670 367 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm29781-201ENSMUST00000203862 478 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm44688-201ENSMUST00000209083 537 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 AC167192.1-201ENSMUST00000225908 139 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col18a1P39061 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col18a1P39061 Gm22220-201ENSMUST00000082671 149 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm23448-201ENSMUST00000083151 104 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Gm22350-201ENSMUST00000083924 156 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col18a1P39061 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col18a1P39061 Gm42559-201ENSMUST00000201811 3532 ntBASIC7.52□□□□□ -1.21
Col18a1P39061 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col18a1P39061 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col18a1P39061 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.52□□□□□ -1.21
Col18a1P39061 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col18a1P39061 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col18a1P39061 Gm42923-201ENSMUST00000198438 2896 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm14563-201ENSMUST00000120571 354 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm14065-201ENSMUST00000120848 585 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm14212-201ENSMUST00000122023 826 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm36986-201ENSMUST00000195320 353 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm17935-201ENSMUST00000196649 772 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm44281-201ENSMUST00000203090 166 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col18a1P39061 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm37553-201ENSMUST00000194135 1602 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm37174-201ENSMUST00000194699 3058 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.51□□□□□ -1.21
Col18a1P39061 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 AC165260.6-204ENSMUST00000225571 3508 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col18a1P39061 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC7.51□□□□□ -1.21
Col18a1P39061 Gm5405-201ENSMUST00000120478 609 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm11358-201ENSMUST00000122310 373 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm12854-201ENSMUST00000128518 297 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm22818-201ENSMUST00000157446 104 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm29576-201ENSMUST00000188020 678 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm28354-201ENSMUST00000190904 678 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm37404-201ENSMUST00000195726 359 ntBASIC7.51□□□□□ -1.21
Col18a1P39061 Gm43238-201ENSMUST00000196463 359 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms