Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Mir688-201ENSMUST00000102055 75 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sdc1P18828 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm14520-201ENSMUST00000119258 387 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm12638-201ENSMUST00000119531 298 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm14725-201ENSMUST00000120324 828 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm12101-201ENSMUST00000121590 390 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Mir1960-201ENSMUST00000157488 78 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm24692-201ENSMUST00000157761 146 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm4152-201ENSMUST00000172675 259 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm28094-201ENSMUST00000185262 390 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm28803-201ENSMUST00000190385 764 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm19086-201ENSMUST00000190772 665 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm37177-201ENSMUST00000193768 417 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm43444-201ENSMUST00000198123 291 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm44412-201ENSMUST00000203018 294 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm32899-201ENSMUST00000219694 207 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 AC154767.2-201ENSMUST00000224584 414 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sdc1P18828 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm6990-201ENSMUST00000086830 348 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Sdc1P18828 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Sdc1P18828 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.36□□□□□ -1.71
Sdc1P18828 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Sdc1P18828 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sdc1P18828 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm25916-201ENSMUST00000104263 131 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Mir879-201ENSMUST00000104703 76 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm11774-201ENSMUST00000118601 293 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Gm15012-201ENSMUST00000119176 106 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Gm12332-201ENSMUST00000121397 922 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Gm23883-201ENSMUST00000122686 290 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Gm22025-201ENSMUST00000122734 302 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm24442-201ENSMUST00000157238 327 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Gm22804-201ENSMUST00000158052 101 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm7952-201ENSMUST00000180540 984 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Gm26959-201ENSMUST00000182376 978 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm21617-201ENSMUST00000188297 691 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm37241-201ENSMUST00000191736 523 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sdc1P18828 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm44487-201ENSMUST00000205145 325 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC4.35□□□□□ -1.71
Sdc1P18828 AC154618.2-201ENSMUST00000228299 452 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Sdc1P18828 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Gm23737-201ENSMUST00000082547 159 ntBASIC4.35□□□□□ -1.71
Sdc1P18828 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Sdc1P18828 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
Sdc1P18828 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms