Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm22519-201ENSMUST00000158270 178 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm25433-201ENSMUST00000158283 286 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm24733-201ENSMUST00000158863 253 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm22326-201ENSMUST00000158897 351 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lire1P11260 Gm7952-201ENSMUST00000180540 984 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm38181-201ENSMUST00000181357 720 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm27030-201ENSMUST00000182551 464 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Gm28080-201ENSMUST00000188552 722 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm37103-201ENSMUST00000191830 115 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm37934-201ENSMUST00000192902 402 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm4332-201ENSMUST00000196114 346 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 Gm43105-201ENSMUST00000202987 459 ntBASIC5.59□□□□□ -1.51
Lire1P11260 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.59□□□□□ -1.51
Lire1P11260 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.59□□□□□ -1.51
Lire1P11260 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 AC159819.1-201ENSMUST00000213911 328 ntBASIC5.59□□□□□ -1.51
Lire1P11260 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.59□□□□□ -1.51
Lire1P11260 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lire1P11260 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lire1P11260 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Lire1P11260 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.59□□□□□ -1.51
Lire1P11260 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
Lire1P11260 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lire1P11260 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
Lire1P11260 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Lire1P11260 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.59□□□□□ -1.52
Lire1P11260 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.59□□□□□ -1.52
Lire1P11260 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Lire1P11260 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Lire1P11260 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Lire1P11260 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Lire1P11260 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.58□□□□□ -1.52
Lire1P11260 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.58□□□□□ -1.52
Lire1P11260 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Lire1P11260 Mir700-201ENSMUST00000102169 79 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Gm15016-201ENSMUST00000117300 720 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm14854-201ENSMUST00000117758 841 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm13991-201ENSMUST00000120190 648 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm13430-201ENSMUST00000121366 288 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.58□□□□□ -1.52
Lire1P11260 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Gm23954-201ENSMUST00000157213 353 ntBASIC5.58□□□□□ -1.52
Lire1P11260 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Lire1P11260 Gm2539-203ENSMUST00000181352 746 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm27864-201ENSMUST00000183704 190 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Mir7037-201ENSMUST00000184414 65 ntBASIC5.58□□□□□ -1.52
Lire1P11260 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 Gm37024-201ENSMUST00000192224 868 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.58□□□□□ -1.52
Lire1P11260 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.58□□□□□ -1.52
Lire1P11260 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.58□□□□□ -1.52
Lire1P11260 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.58□□□□□ -1.52
Lire1P11260 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.58□□□□□ -1.52
Lire1P11260 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lire1P11260 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.58□□□□□ -1.52
Lire1P11260 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm9292-201ENSMUST00000222008 710 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm9293-201ENSMUST00000223096 306 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm8256-203ENSMUST00000228692 591 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Gm5045-201ENSMUST00000027054 810 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Lire1P11260 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Gm23677-201ENSMUST00000083156 104 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lire1P11260 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.58□□□□□ -1.52
Lire1P11260 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms