Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.88□□□□□ -1.63
P06344 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.88□□□□□ -1.63
P06344 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
P06344 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.88□□□□□ -1.63
P06344 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.88□□□□□ -1.63
P06344 Gm5066-201ENSMUST00000188479 822 ntBASIC4.88□□□□□ -1.63
P06344 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.88□□□□□ -1.63
P06344 Gm37336-202ENSMUST00000193705 468 ntBASIC4.88□□□□□ -1.63
P06344 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 Gm6543-201ENSMUST00000197353 808 ntBASIC4.88□□□□□ -1.63
P06344 Gm42824-201ENSMUST00000199361 247 ntBASIC4.88□□□□□ -1.63
P06344 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.88□□□□□ -1.63
P06344 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.88□□□□□ -1.63
P06344 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.88□□□□□ -1.63
P06344 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.88□□□□□ -1.63
P06344 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC4.88□□□□□ -1.63
P06344 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.88□□□□□ -1.63
P06344 Gm36501-201ENSMUST00000221857 745 ntBASIC4.88□□□□□ -1.63
P06344 AC129597.1-201ENSMUST00000223046 1234 ntBASIC4.88□□□□□ -1.63
P06344 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.88□□□□□ -1.63
P06344 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.88□□□□□ -1.63
P06344 AC154806.3-201ENSMUST00000227376 439 ntBASIC4.88□□□□□ -1.63
P06344 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P06344 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P06344 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
P06344 Vaultrc5-201ENSMUST00000083211 143 ntBASIC4.88□□□□□ -1.63
P06344 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
P06344 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
P06344 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
P06344 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.88□□□□□ -1.63
P06344 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
P06344 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
P06344 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.88□□□□□ -1.63
P06344 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 Gm6818-201ENSMUST00000190556 2558 ntBASIC4.88□□□□□ -1.63
P06344 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.88□□□□□ -1.63
P06344 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
P06344 Gm14886-201ENSMUST00000117208 2629 ntBASIC4.88□□□□□ -1.63
P06344 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
P06344 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
P06344 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.87□□□□□ -1.63
P06344 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.87□□□□□ -1.63
P06344 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.87□□□□□ -1.63
P06344 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.87□□□□□ -1.63
P06344 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.87□□□□□ -1.63
P06344 Gm14874-201ENSMUST00000118995 438 ntBASIC4.87□□□□□ -1.63
P06344 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Gm15152-201ENSMUST00000121540 394 ntBASIC4.87□□□□□ -1.63
P06344 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.87□□□□□ -1.63
P06344 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
P06344 Gm25430-201ENSMUST00000157614 289 ntBASIC4.87□□□□□ -1.63
P06344 Gm22916-201ENSMUST00000157616 119 ntBASIC4.87□□□□□ -1.63
P06344 Gm26489-201ENSMUST00000157880 264 ntBASIC4.87□□□□□ -1.63
P06344 Gm22730-201ENSMUST00000158085 171 ntBASIC4.87□□□□□ -1.63
P06344 Gm10087-201ENSMUST00000167650 330 ntBASIC4.87□□□□□ -1.63
P06344 Gm22411-201ENSMUST00000175462 126 ntBASIC4.87□□□□□ -1.63
P06344 Gm22002-201ENSMUST00000175622 125 ntBASIC4.87□□□□□ -1.63
P06344 Mir6412-201ENSMUST00000184477 97 ntBASIC4.87□□□□□ -1.63
P06344 Gm27781-201ENSMUST00000185185 92 ntBASIC4.87□□□□□ -1.63
P06344 Gm18553-201ENSMUST00000194152 634 ntBASIC4.87□□□□□ -1.63
P06344 Gm38360-201ENSMUST00000195130 454 ntBASIC4.87□□□□□ -1.63
P06344 Gm37676-201ENSMUST00000195496 507 ntBASIC4.87□□□□□ -1.63
P06344 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.87□□□□□ -1.63
P06344 Gm29755-201ENSMUST00000196976 948 ntBASIC4.87□□□□□ -1.63
P06344 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Gm43044-201ENSMUST00000198091 379 ntBASIC4.87□□□□□ -1.63
P06344 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.87□□□□□ -1.63
P06344 Gm18871-201ENSMUST00000218655 745 ntBASIC4.87□□□□□ -1.63
P06344 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
P06344 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P06344 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.87□□□□□ -1.63
P06344 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P06344 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P06344 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P06344 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P06344 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P06344 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
P06344 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
P06344 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P06344 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.87□□□□□ -1.63
P06344 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P06344 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
P06344 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
P06344 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms