Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.01□□□□□ -1.61
P04213 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.01□□□□□ -1.61
P04213 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.01□□□□□ -1.61
P04213 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.01□□□□□ -1.61
P04213 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
P04213 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
P04213 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
P04213 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
P04213 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
P04213 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
P04213 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.01□□□□□ -1.61
P04213 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
P04213 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
P04213 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.01□□□□□ -1.61
P04213 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
P04213 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
P04213 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
P04213 Gm10933-201ENSMUST00000221891 1861 ntBASIC5□□□□□ -1.61
P04213 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5□□□□□ -1.61
P04213 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5□□□□□ -1.61
P04213 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
P04213 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
P04213 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
P04213 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
P04213 Gm22468-201ENSMUST00000116680 120 ntBASIC5□□□□□ -1.61
P04213 Gm26248-201ENSMUST00000116700 121 ntBASIC5□□□□□ -1.61
P04213 Gm26137-201ENSMUST00000116701 121 ntBASIC5□□□□□ -1.61
P04213 Gm26190-201ENSMUST00000116704 121 ntBASIC5□□□□□ -1.61
P04213 Gm24617-201ENSMUST00000116705 121 ntBASIC5□□□□□ -1.61
P04213 Gm25778-201ENSMUST00000116713 121 ntBASIC5□□□□□ -1.61
P04213 Gm25774-201ENSMUST00000116717 121 ntBASIC5□□□□□ -1.61
P04213 Gm22102-201ENSMUST00000116730 121 ntBASIC5□□□□□ -1.61
P04213 Gm23177-201ENSMUST00000116784 121 ntBASIC5□□□□□ -1.61
P04213 Gm24193-201ENSMUST00000116801 121 ntBASIC5□□□□□ -1.61
P04213 Gm24744-201ENSMUST00000116833 121 ntBASIC5□□□□□ -1.61
P04213 Gm24427-201ENSMUST00000116896 121 ntBASIC5□□□□□ -1.61
P04213 Gm22346-201ENSMUST00000116918 121 ntBASIC5□□□□□ -1.61
P04213 Gm23606-201ENSMUST00000116938 121 ntBASIC5□□□□□ -1.61
P04213 Gm22029-201ENSMUST00000116940 121 ntBASIC5□□□□□ -1.61
P04213 Gm26298-201ENSMUST00000116956 121 ntBASIC5□□□□□ -1.61
P04213 Gm23844-201ENSMUST00000116959 121 ntBASIC5□□□□□ -1.61
P04213 Gm24484-201ENSMUST00000117009 121 ntBASIC5□□□□□ -1.61
P04213 Gm25347-201ENSMUST00000117026 121 ntBASIC5□□□□□ -1.61
P04213 Gm22112-201ENSMUST00000117032 121 ntBASIC5□□□□□ -1.61
P04213 Gm15185-201ENSMUST00000117397 746 ntBASIC5□□□□□ -1.61
P04213 Gm5381-201ENSMUST00000117975 1250 ntBASIC5□□□□□ -1.61
P04213 Gm15772-201ENSMUST00000118533 438 ntBASIC5□□□□□ -1.61
P04213 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5□□□□□ -1.61
P04213 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5□□□□□ -1.61
P04213 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5□□□□□ -1.61
P04213 Gm6542-201ENSMUST00000153606 772 ntBASIC5□□□□□ -1.61
P04213 Gm24940-201ENSMUST00000158326 108 ntBASIC5□□□□□ -1.61
P04213 Gm7152-201ENSMUST00000163570 605 ntBASIC5□□□□□ -1.61
P04213 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
P04213 Gm6047-201ENSMUST00000167221 574 ntBASIC5□□□□□ -1.61
P04213 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
P04213 Mir3572-201ENSMUST00000175549 86 ntBASIC5□□□□□ -1.61
P04213 Gm22991-201ENSMUST00000178126 121 ntBASIC5□□□□□ -1.61
P04213 Gm25754-201ENSMUST00000178653 121 ntBASIC5□□□□□ -1.61
P04213 Gm22419-201ENSMUST00000178780 121 ntBASIC5□□□□□ -1.61
P04213 Gm24802-201ENSMUST00000178897 121 ntBASIC5□□□□□ -1.61
P04213 Gm25208-201ENSMUST00000178964 121 ntBASIC5□□□□□ -1.61
P04213 Gm24567-201ENSMUST00000179294 121 ntBASIC5□□□□□ -1.61
P04213 Gm23943-201ENSMUST00000179712 121 ntBASIC5□□□□□ -1.61
P04213 Gm25228-201ENSMUST00000180121 121 ntBASIC5□□□□□ -1.61
P04213 Gm23304-201ENSMUST00000180209 121 ntBASIC5□□□□□ -1.61
P04213 Gm27688-201ENSMUST00000183634 91 ntBASIC5□□□□□ -1.61
P04213 Gm27266-201ENSMUST00000184521 123 ntBASIC5□□□□□ -1.61
P04213 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5□□□□□ -1.61
P04213 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5□□□□□ -1.61
P04213 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5□□□□□ -1.61
P04213 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5□□□□□ -1.61
P04213 Gm17999-201ENSMUST00000211568 542 ntBASIC5□□□□□ -1.61
P04213 Gm45734-201ENSMUST00000211916 411 ntBASIC5□□□□□ -1.61
P04213 AC158803.2-201ENSMUST00000219452 679 ntBASIC5□□□□□ -1.61
P04213 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5□□□□□ -1.61
P04213 Gm2645-201ENSMUST00000223516 547 ntBASIC5□□□□□ -1.61
P04213 AC121599.1-201ENSMUST00000224276 449 ntBASIC5□□□□□ -1.61
P04213 AC163646.1-201ENSMUST00000227704 397 ntBASIC5□□□□□ -1.61
P04213 Snord59a-201ENSMUST00000082844 74 ntBASIC5□□□□□ -1.61
P04213 Mir20a-201ENSMUST00000083508 107 ntBASIC5□□□□□ -1.61
P04213 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
P04213 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
P04213 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
P04213 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5□□□□□ -1.61
P04213 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5□□□□□ -1.61
P04213 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
P04213 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
P04213 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
P04213 Gm3962-201ENSMUST00000173027 2587 ntBASIC5□□□□□ -1.61
P04213 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
P04213 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
P04213 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC4.99□□□□□ -1.61
P04213 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
P04213 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.99□□□□□ -1.61
P04213 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.99□□□□□ -1.61
P04213 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
P04213 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
P04213 Gm23910-201ENSMUST00000104597 132 ntBASIC4.99□□□□□ -1.61
P04213 Gm11486-201ENSMUST00000107322 478 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms