Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC154642.1-201ENSMUST00000224173 740 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 AC164295.1-201ENSMUST00000224861 186 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm24454-201ENSMUST00000083349 132 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.31□□□□□ -1.72
Hmgb3O54879 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hmgb3O54879 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hmgb3O54879 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmgb3O54879 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm23149-201ENSMUST00000158837 230 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm27348-201ENSMUST00000184511 170 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm37463-201ENSMUST00000193819 796 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm45700-201ENSMUST00000205866 347 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm45596-201ENSMUST00000209279 434 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm17999-201ENSMUST00000211568 542 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hmgb3O54879 AC148328.2-201ENSMUST00000216960 262 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC4.3□□□□□ -1.72
Hmgb3O54879 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 AC163631.1-201ENSMUST00000225041 598 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmgb3O54879 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm25818-201ENSMUST00000083282 164 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm37959-201ENSMUST00000191700 2897 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmgb3O54879 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.3□□□□□ -1.72
Hmgb3O54879 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hmgb3O54879 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hmgb3O54879 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm9519-201ENSMUST00000206108 1337 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm24272-201ENSMUST00000102329 98 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm24733-201ENSMUST00000158863 253 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm21614-201ENSMUST00000183260 1005 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm28527-201ENSMUST00000185210 297 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm18350-201ENSMUST00000187395 955 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm38328-201ENSMUST00000195582 317 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm42579-201ENSMUST00000200512 734 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm43772-201ENSMUST00000202052 379 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm44074-201ENSMUST00000204562 337 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.29□□□□□ -1.72
Hmgb3O54879 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 AC112680.2-201ENSMUST00000213119 595 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC4.29□□□□□ -1.72
Hmgb3O54879 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hmgb3O54879 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb3O54879 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms