Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC6.34□□□□□ -1.39
Ddx56Q9D0R4 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.34□□□□□ -1.4
Ddx56Q9D0R4 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.34□□□□□ -1.4
Ddx56Q9D0R4 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.4
Ddx56Q9D0R4 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ddx56Q9D0R4 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.4
Ddx56Q9D0R4 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm15021-201ENSMUST00000117832 742 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm15332-201ENSMUST00000118386 357 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Defa-ps1-201ENSMUST00000119062 282 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm15828-201ENSMUST00000119911 522 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Defa-ps6-201ENSMUST00000122172 282 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm23855-201ENSMUST00000158377 135 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm28917-201ENSMUST00000187294 237 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm28766-201ENSMUST00000191086 234 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm38231-201ENSMUST00000192030 347 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm37358-201ENSMUST00000195492 479 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm18340-201ENSMUST00000196342 609 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm44830-201ENSMUST00000207667 584 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm7639-201ENSMUST00000212608 484 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm30738-201ENSMUST00000221346 502 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm10108-201ENSMUST00000078246 319 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm38375-201ENSMUST00000194610 2227 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ddx56Q9D0R4 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm12643-201ENSMUST00000116078 374 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm12131-201ENSMUST00000117479 359 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm7421-201ENSMUST00000119298 639 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm7365-201ENSMUST00000120877 639 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm11990-201ENSMUST00000121505 897 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm11879-201ENSMUST00000121885 702 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm12152-201ENSMUST00000122465 684 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm4725-201ENSMUST00000151048 587 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm17061-201ENSMUST00000163167 499 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm22701-201ENSMUST00000175371 291 ntBASIC6.32□□□□□ -1.4
Ddx56Q9D0R4 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms