Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm15108-201ENSMUST00000116160 803 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm15616-201ENSMUST00000118662 375 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm15385-201ENSMUST00000118725 667 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm12565-201ENSMUST00000119004 649 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm14125-202ENSMUST00000120921 756 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm15501-202ENSMUST00000140687 625 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Mir8118-201ENSMUST00000183962 129 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm3454-201ENSMUST00000185571 412 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm28560-201ENSMUST00000186091 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm28334-201ENSMUST00000186653 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm28495-201ENSMUST00000188452 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm28232-201ENSMUST00000188683 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm28481-201ENSMUST00000189231 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm29059-201ENSMUST00000191534 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm37765-201ENSMUST00000192395 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm37237-201ENSMUST00000192893 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm36968-201ENSMUST00000193737 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm38290-201ENSMUST00000195238 315 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm42958-201ENSMUST00000197595 318 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm42818-201ENSMUST00000198869 987 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm43171-201ENSMUST00000199882 291 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 AL590614.1-201ENSMUST00000226037 268 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nkx6-1Q99MA9 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm25795-201ENSMUST00000104421 132 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm12077-201ENSMUST00000117049 364 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm8424-201ENSMUST00000117716 988 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm14986-201ENSMUST00000121262 1002 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm14212-201ENSMUST00000122023 826 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm4997-201ENSMUST00000154056 360 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm25374-201ENSMUST00000158158 101 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm8358-201ENSMUST00000167222 555 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm23162-201ENSMUST00000175081 121 ntBASIC6.2□□□□□ -1.42
Nkx6-1Q99MA9 Gm20691-201ENSMUST00000176889 333 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms