Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.06□□□□□ -1.28
Clp1Q99LI9 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Clp1Q99LI9 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm42483-201ENSMUST00000197556 1742 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm38699-201ENSMUST00000221301 1740 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm23739-201ENSMUST00000102295 108 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm8202-201ENSMUST00000117682 310 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm15916-201ENSMUST00000118355 736 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm14331-201ENSMUST00000120396 409 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm16445-201ENSMUST00000120399 714 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm5646-201ENSMUST00000120568 714 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm25553-201ENSMUST00000158076 79 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm18953-201ENSMUST00000175694 300 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm21754-201ENSMUST00000177550 479 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm15143-201ENSMUST00000178180 714 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm5947-201ENSMUST00000179156 714 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm5645-201ENSMUST00000179597 714 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Mir7020-201ENSMUST00000183787 70 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Mir7220-201ENSMUST00000183978 60 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Trbv22-201ENSMUST00000191697 291 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm37430-201ENSMUST00000193039 196 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm37095-201ENSMUST00000195421 205 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm36985-201ENSMUST00000195595 379 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm43354-201ENSMUST00000196862 346 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm42437-201ENSMUST00000197263 923 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm44360-201ENSMUST00000200081 82 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 BC049739-201ENSMUST00000202626 660 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm44990-201ENSMUST00000203922 217 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm46146-201ENSMUST00000217483 346 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm19195-201ENSMUST00000222018 511 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm30155-201ENSMUST00000223458 339 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 AC166574.7-201ENSMUST00000228502 704 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm5514-201ENSMUST00000060477 306 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm16415-201ENSMUST00000080097 489 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm7731-201ENSMUST00000091759 470 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm44248-201ENSMUST00000203079 1549 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Gm13821-201ENSMUST00000202029 3201 ntBASIC7.05□□□□□ -1.28
Clp1Q99LI9 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Clp1Q99LI9 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Clp1Q99LI9 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms