Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm24709-201ENSMUST00000104123 132 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm24886-201ENSMUST00000104384 123 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm13690-201ENSMUST00000118989 285 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm8761-201ENSMUST00000121507 955 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm22361-201ENSMUST00000158435 176 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm3170-201ENSMUST00000168753 850 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm3348-201ENSMUST00000177813 850 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm27855-201ENSMUST00000184122 128 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm18702-201ENSMUST00000196923 588 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm19104-201ENSMUST00000198392 679 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm6362-201ENSMUST00000217686 836 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Mir143-201ENSMUST00000083511 63 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.25□□□□□ -1.57
Lsm1Q8VC85 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm14874-201ENSMUST00000118995 438 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm11533-201ENSMUST00000120287 477 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm19087-201ENSMUST00000191430 946 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm8826-201ENSMUST00000193161 948 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm10709-201ENSMUST00000213318 480 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm19174-201ENSMUST00000216944 956 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Lsm1Q8VC85 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm22372-201ENSMUST00000104589 136 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm3931-201ENSMUST00000119038 455 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm15044-201ENSMUST00000120703 598 ntBASIC5.23□□□□□ -1.57
Lsm1Q8VC85 Gm25048-201ENSMUST00000158598 91 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms