Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm24272-201ENSMUST00000102329 98 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm12520-201ENSMUST00000117493 316 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm11987-201ENSMUST00000118524 381 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm13484-201ENSMUST00000120738 412 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm8032-201ENSMUST00000171009 574 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm21241-201ENSMUST00000179551 934 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm17934-201ENSMUST00000192818 422 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm37758-201ENSMUST00000194275 629 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm18150-201ENSMUST00000195341 645 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm43436-201ENSMUST00000199308 147 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm44432-201ENSMUST00000203342 938 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm17987-201ENSMUST00000206902 603 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm18618-201ENSMUST00000222211 473 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 AC130823.2-201ENSMUST00000226169 290 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.79□□□□□ -1.48
Clrn1Q8K445 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clrn1Q8K445 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clrn1Q8K445 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.78□□□□□ -1.48
Clrn1Q8K445 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Clrn1Q8K445 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Clrn1Q8K445 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clrn1Q8K445 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.78□□□□□ -1.48
Clrn1Q8K445 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.78□□□□□ -1.48
Clrn1Q8K445 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Clrn1Q8K445 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.78□□□□□ -1.48
Clrn1Q8K445 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Clrn1Q8K445 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms