Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm38181-201ENSMUST00000181357 720 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm27887-201ENSMUST00000184367 102 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm29376-201ENSMUST00000189357 835 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm37700-201ENSMUST00000192617 965 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm37445-201ENSMUST00000195318 242 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Mir409-201ENSMUST00000198153 79 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm43456-201ENSMUST00000202519 457 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm3257-201ENSMUST00000207217 675 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cchcr1Q8K2I2 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm25422-201ENSMUST00000104219 129 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm11821-201ENSMUST00000117335 979 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm14563-201ENSMUST00000120571 354 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm13259-201ENSMUST00000120792 456 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm23669-201ENSMUST00000157470 128 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm25430-201ENSMUST00000157614 289 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm18177-201ENSMUST00000188373 404 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Mir219c-201ENSMUST00000199860 60 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm18587-201ENSMUST00000213736 841 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cchcr1Q8K2I2 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm6503-201ENSMUST00000210829 2225 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm14985-201ENSMUST00000118693 786 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm11737-201ENSMUST00000118713 468 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm15959-201ENSMUST00000121724 368 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm13077-201ENSMUST00000121941 484 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm23211-201ENSMUST00000122717 308 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm23115-201ENSMUST00000158480 108 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm24175-201ENSMUST00000158931 129 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm18199-201ENSMUST00000173820 835 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm38015-201ENSMUST00000193048 188 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm42522-201ENSMUST00000196071 255 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm18996-201ENSMUST00000214851 755 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Cchcr1Q8K2I2 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cchcr1Q8K2I2 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms