Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm44802-201ENSMUST00000208026 1916 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Gpr1-201ENSMUST00000050536 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Dazap2-201ENSMUST00000000356 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim35Q8C006 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Trim35Q8C006 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Ankfn1-202ENSMUST00000128717 2391 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim35Q8C006 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim35Q8C006 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.54□□□□□ -1.04
Trim35Q8C006 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm5862-201ENSMUST00000072286 1972 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 AC122402.1-201ENSMUST00000225199 2303 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Klrb1b-201ENSMUST00000032472 2228 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm12275-201ENSMUST00000119805 307 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm15481-201ENSMUST00000120264 539 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm9003-201ENSMUST00000121810 482 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm12956-201ENSMUST00000122184 414 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm24409-201ENSMUST00000157881 152 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm22983-201ENSMUST00000158308 104 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm8114-201ENSMUST00000172225 484 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm17973-201ENSMUST00000174509 520 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm17045-201ENSMUST00000178600 844 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trim35Q8C006 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm28419-201ENSMUST00000189108 475 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm5853-201ENSMUST00000197183 632 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm45213-201ENSMUST00000206065 304 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 AC154767.1-201ENSMUST00000224669 358 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Gm22577-201ENSMUST00000083731 109 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Rpl36-ps3-201ENSMUST00000085720 315 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Mir496a-201ENSMUST00000093627 79 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Crbn-201ENSMUST00000013882 2072 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Dlg2-202ENSMUST00000098308 2329 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.53□□□□□ -1.04
Trim35Q8C006 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim35Q8C006 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim35Q8C006 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim35Q8C006 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC8.52□□□□□ -1.04
Trim35Q8C006 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim35Q8C006 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.52□□□□□ -1.04
Trim35Q8C006 Gm20589-201ENSMUST00000204099 2530 ntBASIC8.52□□□□□ -1.04
Trim35Q8C006 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm4858-203ENSMUST00000195847 1451 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim35Q8C006 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim35Q8C006 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Trim35Q8C006 AC132412.1-201ENSMUST00000204155 2724 ntBASIC8.52□□□□□ -1.05
Trim35Q8C006 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim35Q8C006 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms