Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm7840-201ENSMUST00000122086 533 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm15501-202ENSMUST00000140687 625 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm26925-201ENSMUST00000182470 957 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Mir7047-201ENSMUST00000184595 64 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm28116-201ENSMUST00000189064 387 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm46327-201ENSMUST00000218240 365 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.68□□□□□ -1.34
Shank3Q4ACU6 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shank3Q4ACU6 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm8214-201ENSMUST00000172123 351 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm43237-201ENSMUST00000196835 1044 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm42459-201ENSMUST00000199679 742 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm45209-201ENSMUST00000207122 353 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm9512-201ENSMUST00000223112 497 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 AC154724.1-201ENSMUST00000225782 821 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm22456-201ENSMUST00000082578 125 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm24763-201ENSMUST00000083688 190 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm15297-201ENSMUST00000117795 290 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm13149-201ENSMUST00000122071 339 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm16250-201ENSMUST00000148974 256 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Mir6960-201ENSMUST00000183449 61 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm3145-201ENSMUST00000188584 220 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Vmn1r82-202ENSMUST00000191002 918 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm37097-201ENSMUST00000193676 336 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm45008-201ENSMUST00000206420 493 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm5045-201ENSMUST00000027054 810 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.67□□□□□ -1.34
Shank3Q4ACU6 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Shank3Q4ACU6 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm37180-201ENSMUST00000195335 2819 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm22493-201ENSMUST00000104494 132 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm8202-201ENSMUST00000117682 310 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm11447-201ENSMUST00000118983 858 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm23925-202ENSMUST00000188429 132 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm29592-201ENSMUST00000189434 370 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm29332-201ENSMUST00000190829 227 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC6.66□□□□□ -1.34
Shank3Q4ACU6 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms