Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm6543-201ENSMUST00000197353 808 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm45722-201ENSMUST00000213075 466 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm8137-201ENSMUST00000218997 463 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm11278-201ENSMUST00000121002 997 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm24236-201ENSMUST00000157794 134 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm26169-201ENSMUST00000158420 135 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm8993-201ENSMUST00000182182 983 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm29284-201ENSMUST00000188363 255 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm5734-201ENSMUST00000189787 913 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm29755-201ENSMUST00000196976 948 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Upf3bQ3ULL6 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm3943-201ENSMUST00000118606 718 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm15490-201ENSMUST00000119894 387 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm13024-201ENSMUST00000121756 718 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm3008-201ENSMUST00000160566 571 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm28883-201ENSMUST00000189256 369 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm37966-201ENSMUST00000193122 326 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm37681-201ENSMUST00000193880 727 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Gm43215-201ENSMUST00000199108 252 ntBASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Upf3bQ3ULL6 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms