Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm19131-201ENSMUST00000203408 789 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 AC132315.1-201ENSMUST00000221771 390 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm9512-201ENSMUST00000223112 497 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 AC102603.1-201ENSMUST00000227481 584 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm23624-201ENSMUST00000082463 321 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC8.57□□□□□ -1.04
Col17a1Q07563 AC160028.2-201ENSMUST00000218937 2519 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm11874-201ENSMUST00000117437 130 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm15357-201ENSMUST00000119160 285 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Col17a1Q07563 n-R5s174-201ENSMUST00000122638 121 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm24359-201ENSMUST00000158418 221 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm28859-201ENSMUST00000186650 616 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC8.57□□□□□ -1.04
Col17a1Q07563 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Col17a1Q07563 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Col17a1Q07563 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm44209-201ENSMUST00000204556 4153 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm22710-201ENSMUST00000116892 125 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm11893-201ENSMUST00000117829 491 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm23391-201ENSMUST00000157579 104 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Zakit-201ENSMUST00000157677 308 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm24103-201ENSMUST00000174930 77 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm22693-201ENSMUST00000175049 442 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm27427-201ENSMUST00000185134 193 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm37760-201ENSMUST00000194726 3841 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC8.56□□□□□ -1.04
Col17a1Q07563 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col17a1Q07563 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC8.56□□□□□ -1.04
Col17a1Q07563 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col17a1Q07563 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Col17a1Q07563 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 AC139754.2-201ENSMUST00000218037 1455 ntBASIC8.56□□□□□ -1.04
Col17a1Q07563 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col17a1Q07563 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Gm37553-201ENSMUST00000194135 1602 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Gm37936-201ENSMUST00000194647 1322 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 AC163296.2-201ENSMUST00000220177 1315 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Mir1192-201ENSMUST00000116976 121 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 Mir1907-201ENSMUST00000122509 90 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Gm27568-201ENSMUST00000184220 99 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Gm44871-201ENSMUST00000207821 497 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col17a1Q07563 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Gm42494-201ENSMUST00000196515 3051 ntBASIC8.55□□□□□ -1.04
Col17a1Q07563 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col17a1Q07563 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col17a1Q07563 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms